RT @phylogenomics: From @pzmyers: ENCODE gets a public reaming http://t.co/mrhd7A3E9p Ouch.
2:26pm February 23rd 2013 via HootSuite
RT @BlueSEQ: MIT Technology Review has a look at @nabsys http://t.co/KVZJ4AMVZY #AGBT13
1:25pm February 23rd 2013 via HootSuite
A solid-state, inexpensive mapper. Cool. RT @pathogenomenick: RT @OmicsOmicsBlog: Nabsys unveiled http://t.co/s25a52njbZ #AGBT13
12:25pm February 23rd 2013 via HootSuite
RT @BlueSEQ: Thanks to all who tweeted #AGBT13. We're collecting the tweets here: http://t.co/9iwqJJuieC
11:25am February 23rd 2013 via HootSuite
The Bina Box - a fast alignment appliance that has #BigData opportunity | seqjunkie http://t.co/XfOMFwqAFY #AGBT13
10:25am February 23rd 2013 via HootSuite
‘Twitter-jacked’: The risk of social media marketing | Marketing-Mistress http://t.co/LoSMYNgwQj via RT @marketmistress
9:18am February 23rd 2013 via HootSuite
RT @twistedbacteria: What happens when you give a scientist keys to the national Twitter account? http://t.co/oD3nI9baYE Via @scicurious
8:48am February 23rd 2013 via HootSuite
RT @Pogue: TONIGHT'S MEDITATION: If you join the words "the" and "IRS," it spells "theirs."
5:26pm February 22nd 2013 via HootSuite
Alas I missed another RT @mashable: Bitcoin's New Bubble: Digital Currency Now Trading at $30 http://t.co/ioVMdEn30e via @DailyDot
5:25pm February 22nd 2013 via HootSuite
RT @bioitworld: .@Eric_Lander on Reddit: http://t.co/pXnmdaZkcW Weighed in on genomics' future, coolest sci discovery, and gangnam style
4:25pm February 22nd 2013 via HootSuite
RT @NIAIDBioIT: Video from NIST's #Cloud #Computing and #BigData Conference Jan 15-16, 2013, is available online http://t.co/Z5OOA0204N
3:25pm February 22nd 2013 via HootSuite
RT @techreview: Who do YOU you think belongs on the 2013 list of Innovators Under 35? Nominations are now open: http://t.co/JRUiNdlLDq
2:26pm February 22nd 2013 via HootSuite
.@evolvability Haven't heard of that one before! :^)
1:40pm February 22nd 2013 via HootSuite in reply to
MT @LIFECorporation: Life CEO Greg Lucier & Pres. of Comm. Ops Nicolas Bartholemy at @NMNH L.A.B. http://t.co/2Z4jD3JiNe
1:39pm February 22nd 2013 via HootSuite
RT @ldtimmerman: The Reimbursed Personal Genome - Five Years Away? http://t.co/6nW0kUAE57 by @tanseyverse
1:21pm February 22nd 2013 via HootSuite
Is a Ph.D. bad for your health? : Nature Guest The Sceptical Chymist http://t.co/yM1ENq7Cni
12:25pm February 22nd 2013 via HootSuite
The Number One Super Secret to Getting What You Want in 2013 - Forbes http://t.co/5o6zhMQ3Dh
11:23am February 22nd 2013 via HootSuite
RT @brianglanz: Brilliant that @Sagebio have absorbed the DREAM project, to run more #openscience challenges http://t.co/Lfmato4ghv
9:35am February 22nd 2013 via HootSuite
No résumé needed, only your online presence - Business Insider http://t.co/6je2jsaAac
MT @mtomasson: Zerhouni "A disaster for research": The #sequester will set back medical science for a generation WaPo http://t.co/PfNVCCG4Rt
7:35am February 22nd 2013 via HootSuite
You never know how this might come in handy RT @verge: Al-Qaeda document suggests 22 ways to avoid drone attacks http://t.co/dYC0yX4bdc
6:35am February 22nd 2013 via HootSuite
J. Rothberg: In the lab, close to 800bp reads. Avalanche 597bp perfect on beads. Now without beads! Almost 200bp reads. #AGBT13
7:24pm February 21st 2013 via HootSuite
J. Rothberg: 12K Proton runs to-date, after just a few months. Lastly: Avalanche 640 bp perfect read on PGM in 1.5h #AGBT13
7:23pm February 21st 2013 via HootSuite
J. Rothberg: Slide w/ Moore's law, 'not quite caught up'. This year we 'cross over': 454, SLXA, Ion in 2013. 'On every metric'. #AGBT13
7:21pm February 21st 2013 via HootSuite
J. Rothberg: PII 'mid-2013' 32GB at 100bp, just getting started. PIII, cascading 'TBA', starting at 64GB w PII at 64GB at that time. #AGBT13
7:19pm February 21st 2013 via HootSuite
J. Rothberg: Showing PII signal increasing w/ smaller well size. Showing perfect PII read >190 bp. #AGBT13
7:16pm February 21st 2013 via HootSuite
J. Rothberg: Moving more of 'the machine to the chip' 10y newer chip factories than PGM chips. PII chips: from 1.68 to 0.84 uM pitch #AGBT13
7:15pm February 21st 2013 via HootSuite
J. Rothberg: Proton can support 'the next decade' of sequencing. Proton loading uniformity 'astonishing'. #AGBT13
7:12pm February 21st 2013 via HootSuite
J. Rothberg, Ion Torrent: Over 150K runs on Ion to date. 36 plugins to date, 91 publications. AmpliSeq: now to 6K amplicons #AGBT13
7:04pm February 21st 2013 via HootSuite
A. Papp: Has a high school student who did PGM runs before he received his driver's license! # AGBT13
7:00pm February 21st 2013 via HootSuite
A. Papp: Can see clear differences in allelic imbalance. 'Wow, this is really good stuff'. #AGBT13
6:57pm February 21st 2013 via HootSuite
A. Papp: AmpliSeq RNA saw 5 logs of dynamic range, looked at allelic expression imbalance. Recently: ERCC controls shows linearity. #AGBT13
6:56pm February 21st 2013 via HootSuite
A. Papp: SPA2 gene exp imbal. they studied for 6y. Found 1 SNP responsible for the imbalance. Clear data, Genes Immun. 2013 paper. #AGBT13
6:53pm February 21st 2013 via HootSuite
A. Papp: cis-acting fn. variation, 48/200 cand. genes had allelic imbalance. Validated it on PGM. #AGBT13
6:47pm February 21st 2013 via HootSuite
A. Papp: Allelic expression imbalance can be a key. 1st RNA-Seq on SOLiD showed functional variation with allelic exp.But many FPs. #AGBT13
6:45pm February 21st 2013 via HootSuite
RT @lizworthey: SK: Cost for Kinsmore - Mercy rapid turnaround StatSeq is $13,000 (currently research) #AGBT13
6:40pm February 21st 2013 via HootSuite
A. Papp Ohio State Univ: Targeting RNA for biomarker discovery. Res. core: PGx Res. Network, looking for functional reg. variants #AGBT13
6:38pm February 21st 2013 via HootSuite
Nelen: 155 blinded (known) samples, 6 labs, all labs detected 100% of samples 1st 2 stages. 3rd stage: insuff. DNA in the 1 failure. AGBT13
6:29pm February 21st 2013 via HootSuite
RT @techreview: Carbon Nanotube Transistors Orders of Magnitude Better At Spotting Cancer, Say Bioengineers http://t.co/mlR9hxcf8r
6:25pm February 21st 2013 via HootSuite
Nelen: Out of 65 muts, none missed. HP stretches, indels, point muts, exon deletions. Tested known HP stretches (7) successfully. #AGBT13
Nelen: existing MLPA takes 2-3w. Req'd 100% coverage, 20bp intron/exon boundaries, overlapping amplicons, validated on 150 samples. #agbt13
6:22pm February 21st 2013 via HootSuite
J Boland: 3 platform bake off, 2 Exome kits, Venn diagram between CGI, ILM, Ion, Proton-only SNV is misaligned, manuscript in preparation.
6:11pm February 21st 2013 via HootSuite
J Boland: Q20 out to 150 bases on Proton, cloud analysis of RNA-Seq with SevenBridges.
6:09pm February 21st 2013 via HootSuite
J Boland RNA-Seq on Proton, rRNA levels ~4%, using SBGenomics, StationX and Partek for analysis, challenged. 300GB data.
6:07pm February 21st 2013 via HootSuite
J Boland NCI: 1st Proton study on Cervical Ca. 24 samples, TargetSeq v2 & ASCP v2 in parallel. #AGBT13
6:04pm February 21st 2013 via HootSuite
J Boland NCI: 3.5h Proton 1 runtimes, >100 exomes to date, 10Gb/run now, driving to 15Gb. #AGBT13
6:01pm February 21st 2013 via HootSuite
'Detroit Auto Show' of Genomics RT @bkmacy: Brian Krueger: #AGBT13 day one talks and observations blog post http://t.co/7rVH1HBUe4
5:50pm February 21st 2013 via HootSuite
Almost full house at the #IonTorrent workshop at the Hilton. Join us if you can! http://t.co/CGcXODPdL0
5:46pm February 21st 2013 via HootSuite
Emph. on Clinical RT @nygenome: Marco Island Meeting Presents State of the Genome Tech Industry #AGBT13 http://t.co/OB4GlNpBvj
5:25pm February 21st 2013 via HootSuite
Results of NGS survey 2012 - CLC bio http://t.co/KBusVCq2j4 IMHO representation looks 'off', both by geography and org.
4:25pm February 21st 2013 via HootSuite
